Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm11425-201ENSMUST00000119608 498 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm9396-201ENSMUST00000076703 567 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.98□□□□□ -0.33
Mmp13P33435 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Mmp13P33435 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Mmp13P33435 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Mmp13P33435 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp13P33435 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Gm11803-201ENSMUST00000119966 444 ntBASIC12.97□□□□□ -0.33
Mmp13P33435 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp13P33435 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Gm8810-201ENSMUST00000172895 754 ntBASIC12.97□□□□□ -0.33
Mmp13P33435 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp13P33435 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp13P33435 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Mmp13P33435 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Mmp13P33435 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Mmp13P33435 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp13P33435 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Mmp13P33435 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Mmp13P33435 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp13P33435 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms