Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm1335-201ENSMUST00000121653 386 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm5370-201ENSMUST00000187187 574 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.75□□□□□ -0.53
Cd40lgP27548 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Gm14660-201ENSMUST00000119809 575 ntBASIC11.74□□□□□ -0.53
Cd40lgP27548 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.74□□□□□ -0.53
Cd40lgP27548 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cd40lgP27548 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Gm16177-201ENSMUST00000120728 718 ntBASIC11.73□□□□□ -0.53
Cd40lgP27548 Gm13123-201ENSMUST00000122173 492 ntBASIC11.73□□□□□ -0.53
Cd40lgP27548 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.73□□□□□ -0.53
Cd40lgP27548 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.73□□□□□ -0.53
Cd40lgP27548 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd40lgP27548 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms