Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm13123-201ENSMUST00000122173 492 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Mir1894-201ENSMUST00000122802 81 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm6244-201ENSMUST00000178732 841 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Proscos-202ENSMUST00000178990 666 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm8598-201ENSMUST00000221184 836 ntBASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tnfrsf1aP25118 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm2231-201ENSMUST00000125661 612 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm8810-201ENSMUST00000172895 754 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm9002-201ENSMUST00000178437 499 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms