Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fv4P11370 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fv4P11370 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.26□□□□□ -0.45
Fv4P11370 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Fv4P11370 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fv4P11370 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fv4P11370 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.25□□□□□ -0.45
Fv4P11370 Gm11814-201ENSMUST00000119515 929 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fv4P11370 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.25□□□□□ -0.45
Fv4P11370 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.25□□□□□ -0.45
Fv4P11370 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fv4P11370 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fv4P11370 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Matn2-203ENSMUST00000226766 3252 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.24□□□□□ -0.45
Fv4P11370 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Gm8652-201ENSMUST00000181363 964 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Gm27892-201ENSMUST00000185017 106 ntBASIC12.24□□□□□ -0.45
Fv4P11370 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.24□□□□□ -0.45
Fv4P11370 Gm4768-201ENSMUST00000206199 686 ntBASIC12.24□□□□□ -0.45
Fv4P11370 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fv4P11370 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Fv4P11370 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.23□□□□□ -0.45
Fv4P11370 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.23□□□□□ -0.45
Fv4P11370 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fv4P11370 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms