Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc6P10629 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc6P10629 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.03□□□□□ -0.16
Hoxc6P10629 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxc6P10629 Gm19353-201ENSMUST00000184561 445 ntBASIC14.03□□□□□ -0.16
Hoxc6P10629 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Gm5369-201ENSMUST00000217499 588 ntBASIC14.03□□□□□ -0.16
Hoxc6P10629 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.03□□□□□ -0.16
Hoxc6P10629 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc6P10629 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc6P10629 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxc6P10629 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc6P10629 Gm15515-201ENSMUST00000117827 822 ntBASIC14.02□□□□□ -0.17
Hoxc6P10629 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Gm19994-201ENSMUST00000217086 586 ntBASIC14.02□□□□□ -0.17
Hoxc6P10629 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc6P10629 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc6P10629 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm15131-201ENSMUST00000119124 595 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Gm44545-201ENSMUST00000208262 746 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.01□□□□□ -0.17
Hoxc6P10629 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxc6P10629 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms