Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxb3P09026 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm15432-201ENSMUST00000121106 195 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm3793-201ENSMUST00000204973 672 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm19091-201ENSMUST00000208120 978 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm44548-201ENSMUST00000208929 192 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm7904-201ENSMUST00000217049 465 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxb3P09026 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.72□□□□□ -0.37
Hoxb3P09026 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxb3P09026 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm14539-201ENSMUST00000117527 174 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm26361-201ENSMUST00000158868 186 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Mir6941-201ENSMUST00000184711 59 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm9139-201ENSMUST00000218817 700 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Hoxb3P09026 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.71□□□□□ -0.37
Hoxb3P09026 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxb3P09026 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxb3P09026 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.71□□□□□ -0.38
Hoxb3P09026 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxb3P09026 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxb3P09026 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxb3P09026 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxb3P09026 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms