Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.87□□□□□ -0.51
IghmP01872 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.87□□□□□ -0.51
IghmP01872 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.87□□□□□ -0.51
IghmP01872 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.87□□□□□ -0.51
IghmP01872 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
IghmP01872 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.87□□□□□ -0.51
IghmP01872 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.87□□□□□ -0.51
IghmP01872 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
IghmP01872 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IghmP01872 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.86□□□□□ -0.51
IghmP01872 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.86□□□□□ -0.51
IghmP01872 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
IghmP01872 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gm24231-201ENSMUST00000104315 133 ntBASIC11.86□□□□□ -0.51
IghmP01872 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
IghmP01872 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 Gm15806-201ENSMUST00000120696 955 ntBASIC11.86□□□□□ -0.51
IghmP01872 Gm24644-201ENSMUST00000157114 139 ntBASIC11.86□□□□□ -0.51
IghmP01872 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.86□□□□□ -0.51
IghmP01872 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.86□□□□□ -0.51
IghmP01872 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.86□□□□□ -0.51
IghmP01872 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IghmP01872 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.86□□□□□ -0.51
IghmP01872 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IghmP01872 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.85□□□□□ -0.51
IghmP01872 Gm27486-201ENSMUST00000184923 80 ntBASIC11.85□□□□□ -0.51
IghmP01872 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.85□□□□□ -0.51
IghmP01872 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Gm24526-201ENSMUST00000082921 158 ntBASIC11.85□□□□□ -0.51
IghmP01872 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.85□□□□□ -0.51
IghmP01872 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms