Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
TcraP01849 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.26□□□□□ -0.93
TcraP01849 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
TcraP01849 Mir1897-201ENSMUST00000122581 272 ntBASIC9.26□□□□□ -0.93
TcraP01849 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.26□□□□□ -0.93
TcraP01849 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
TcraP01849 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.26□□□□□ -0.93
TcraP01849 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
TcraP01849 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
TcraP01849 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.25□□□□□ -0.93
TcraP01849 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.25□□□□□ -0.93
TcraP01849 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.25□□□□□ -0.93
TcraP01849 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
TcraP01849 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.25□□□□□ -0.93
TcraP01849 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.25□□□□□ -0.93
TcraP01849 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.25□□□□□ -0.93
TcraP01849 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.25□□□□□ -0.93
TcraP01849 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.25□□□□□ -0.93
TcraP01849 Gm13385-201ENSMUST00000121089 220 ntBASIC9.25□□□□□ -0.93
TcraP01849 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.25□□□□□ -0.93
TcraP01849 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.25□□□□□ -0.93
TcraP01849 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.25□□□□□ -0.93
TcraP01849 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.25□□□□□ -0.93
TcraP01849 Gm5425-201ENSMUST00000214125 459 ntBASIC9.25□□□□□ -0.93
TcraP01849 Gm46209-201ENSMUST00000217912 553 ntBASIC9.25□□□□□ -0.93
TcraP01849 Gm9229-201ENSMUST00000222777 126 ntBASIC9.25□□□□□ -0.93
TcraP01849 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm8396-201ENSMUST00000057361 823 ntBASIC9.25□□□□□ -0.93
TcraP01849 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms