Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm13813-201ENSMUST00000120998 787 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm16215-201ENSMUST00000161990 637 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm9797-201ENSMUST00000052902 613 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Efnb3O35393 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.03□□□□□ -0.8
Efnb3O35393 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Efnb3O35393 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.03□□□□□ -0.8
Efnb3O35393 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Efnb3O35393 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Efnb3O35393 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
Efnb3O35393 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Efnb3O35393 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.02□□□□□ -0.8
Efnb3O35393 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Efnb3O35393 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.02□□□□□ -0.8
Efnb3O35393 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Efnb3O35393 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Efnb3O35393 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Efnb3O35393 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Efnb3O35393 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Efnb3O35393 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Efnb3O35393 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Efnb3O35393 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.02□□□□□ -0.81
Efnb3O35393 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Gm5866-201ENSMUST00000177881 973 ntBASIC10.02□□□□□ -0.81
Efnb3O35393 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Efnb3O35393 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.02□□□□□ -0.81
Efnb3O35393 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.02□□□□□ -0.81
Efnb3O35393 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.02□□□□□ -0.81
Efnb3O35393 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.02□□□□□ -0.81
Efnb3O35393 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.02□□□□□ -0.81
Efnb3O35393 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Efnb3O35393 Gm26035-201ENSMUST00000083065 308 ntBASIC10.02□□□□□ -0.81
Efnb3O35393 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.02□□□□□ -0.81
Efnb3O35393 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Efnb3O35393 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Efnb3O35393 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms