Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Mir7654-201ENSMUST00000185082 70 ntBASIC11.32□□□□□ -0.6
Alx4O35137 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.32□□□□□ -0.6
Alx4O35137 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Alx4O35137 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.32□□□□□ -0.6
Alx4O35137 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.32□□□□□ -0.6
Alx4O35137 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Alx4O35137 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Alx4O35137 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.31□□□□□ -0.6
Alx4O35137 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Alx4O35137 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Alx4O35137 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.31□□□□□ -0.6
Alx4O35137 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.31□□□□□ -0.6
Alx4O35137 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Alx4O35137 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Alx4O35137 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.31□□□□□ -0.6
Alx4O35137 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Gm15703-201ENSMUST00000120250 880 ntBASIC11.31□□□□□ -0.6
Alx4O35137 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Alx4O35137 Gm15429-201ENSMUST00000151268 798 ntBASIC11.31□□□□□ -0.6
Alx4O35137 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.31□□□□□ -0.6
Alx4O35137 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.31□□□□□ -0.6
Alx4O35137 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.31□□□□□ -0.6
Alx4O35137 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Alx4O35137 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.31□□□□□ -0.6
Alx4O35137 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Alx4O35137 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.31□□□□□ -0.6
Alx4O35137 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Alx4O35137 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Alx4O35137 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Alx4O35137 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Gm12151-201ENSMUST00000121374 290 ntBASIC11.3□□□□□ -0.6
Alx4O35137 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.3□□□□□ -0.6
Alx4O35137 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.3□□□□□ -0.6
Alx4O35137 Mir6956-201ENSMUST00000183598 62 ntBASIC11.3□□□□□ -0.6
Alx4O35137 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.3□□□□□ -0.6
Alx4O35137 Gm8099-201ENSMUST00000200510 742 ntBASIC11.3□□□□□ -0.6
Alx4O35137 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.3□□□□□ -0.6
Alx4O35137 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms