Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf3O08791 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Ebf3O08791 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf3O08791 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Gm14704-201ENSMUST00000120300 874 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf3O08791 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf3O08791 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf3O08791 Gm3786-201ENSMUST00000202659 378 ntBASIC13.19□□□□□ -0.3
Ebf3O08791 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.19□□□□□ -0.3
Ebf3O08791 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ebf3O08791 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf3O08791 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf3O08791 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm11531-201ENSMUST00000117614 555 ntBASIC13.18□□□□□ -0.3
Ebf3O08791 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.18□□□□□ -0.3
Ebf3O08791 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Ebf3O08791 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm16505-201ENSMUST00000179981 232 ntBASIC13.18□□□□□ -0.3
Ebf3O08791 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf3O08791 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ebf3O08791 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ebf3O08791 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf3O08791 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf3O08791 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.18□□□□□ -0.3
Ebf3O08791 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms