Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm5493S4R2D1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm5493S4R2D1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5493S4R2D1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Gm4799-201ENSMUST00000095396 657 ntBASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5493S4R2D1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm5493S4R2D1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5493S4R2D1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5493S4R2D1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm5493S4R2D1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5493S4R2D1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5493S4R2D1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm5493S4R2D1 Gm9812-201ENSMUST00000061934 968 ntBASIC17.64■□□□□ 0.41
Gm5493S4R2D1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.64■□□□□ 0.41
Gm5493S4R2D1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms