Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb3S4R1G7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb3S4R1G7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
H2afb3S4R1G7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb3S4R1G7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb3S4R1G7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb3S4R1G7 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.83■□□□□ 0.6
H2afb3S4R1G7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb3S4R1G7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Gm7332-201ENSMUST00000118351 454 ntBASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb3S4R1G7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Gm11175-201ENSMUST00000116172 543 ntBASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb3S4R1G7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb3S4R1G7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb3S4R1G7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb3S4R1G7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb3S4R1G7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb3S4R1G7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb3S4R1G7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb3S4R1G7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
H2afb3S4R1G7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb3S4R1G7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
H2afb3S4R1G7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb3S4R1G7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms