Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn6Q9Z262 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cldn6Q9Z262 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Gm5921-201ENSMUST00000075898 882 ntBASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn6Q9Z262 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn6Q9Z262 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.7■□□□□ 0.74
Cldn6Q9Z262 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gm13238-201ENSMUST00000117655 780 ntBASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn6Q9Z262 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cldn6Q9Z262 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cldn6Q9Z262 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn6Q9Z262 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn6Q9Z262 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn6Q9Z262 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn6Q9Z262 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cldn6Q9Z262 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn6Q9Z262 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn6Q9Z262 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Gm43566-201ENSMUST00000196851 808 ntBASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn6Q9Z262 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms