Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RpgrQ9R0X5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RpgrQ9R0X5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RpgrQ9R0X5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RpgrQ9R0X5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RpgrQ9R0X5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RpgrQ9R0X5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RpgrQ9R0X5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RpgrQ9R0X5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RpgrQ9R0X5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RpgrQ9R0X5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RpgrQ9R0X5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.11■□□□□ 0.97
RpgrQ9R0X5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RpgrQ9R0X5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Gm5921-201ENSMUST00000075898 882 ntBASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RpgrQ9R0X5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RpgrQ9R0X5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RpgrQ9R0X5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RpgrQ9R0X5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RpgrQ9R0X5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RpgrQ9R0X5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RpgrQ9R0X5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms