Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.29■□□□□ 0.52
Nubp1Q9R060 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.29■□□□□ 0.52
Nubp1Q9R060 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nubp1Q9R060 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nubp1Q9R060 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nubp1Q9R060 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nubp1Q9R060 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nubp1Q9R060 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.27■□□□□ 0.52
Nubp1Q9R060 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nubp1Q9R060 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nubp1Q9R060 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nubp1Q9R060 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nubp1Q9R060 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nubp1Q9R060 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nubp1Q9R060 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nubp1Q9R060 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.23■□□□□ 0.51
Nubp1Q9R060 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.23■□□□□ 0.51
Nubp1Q9R060 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.23■□□□□ 0.51
Nubp1Q9R060 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nubp1Q9R060 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp1Q9R060 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Gm29257-201ENSMUST00000186115 639 ntBASIC18.21■□□□□ 0.51
Nubp1Q9R060 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp1Q9R060 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Nubp1Q9R060 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Gm5874-201ENSMUST00000096101 508 ntBASIC18.2■□□□□ 0.5
Nubp1Q9R060 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp1Q9R060 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp1Q9R060 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp1Q9R060 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms