Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr4Q9QUK6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.67■□□□□ 0.9
Tlr4Q9QUK6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr4Q9QUK6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr4Q9QUK6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr4Q9QUK6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr4Q9QUK6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr4Q9QUK6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr4Q9QUK6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tlr4Q9QUK6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Tlr4Q9QUK6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.61■□□□□ 0.89
Tlr4Q9QUK6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr4Q9QUK6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr4Q9QUK6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr4Q9QUK6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Tlr4Q9QUK6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tlr4Q9QUK6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr4Q9QUK6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr4Q9QUK6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr4Q9QUK6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr4Q9QUK6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr4Q9QUK6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.59■□□□□ 0.89
Tlr4Q9QUK6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr4Q9QUK6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr4Q9QUK6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr4Q9QUK6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tlr4Q9QUK6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.58■□□□□ 0.89
Tlr4Q9QUK6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tlr4Q9QUK6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr4Q9QUK6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Gm15039-201ENSMUST00000118914 875 ntBASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr4Q9QUK6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr4Q9QUK6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr4Q9QUK6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.54■□□□□ 0.88
Tlr4Q9QUK6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr4Q9QUK6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms