Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tdp2Q9JJX7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tdp2Q9JJX7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.76■□□□□ 0.91
Tdp2Q9JJX7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp2Q9JJX7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp2Q9JJX7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tdp2Q9JJX7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tdp2Q9JJX7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp2Q9JJX7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp2Q9JJX7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.73■□□□□ 0.91
Tdp2Q9JJX7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tdp2Q9JJX7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp2Q9JJX7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp2Q9JJX7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tdp2Q9JJX7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.71■□□□□ 0.91
Tdp2Q9JJX7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp2Q9JJX7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp2Q9JJX7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tdp2Q9JJX7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
Tdp2Q9JJX7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tdp2Q9JJX7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tdp2Q9JJX7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Tdp2Q9JJX7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp2Q9JJX7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tdp2Q9JJX7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tdp2Q9JJX7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tdp2Q9JJX7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tdp2Q9JJX7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tdp2Q9JJX7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.64■□□□□ 0.89
Tdp2Q9JJX7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tdp2Q9JJX7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tdp2Q9JJX7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tdp2Q9JJX7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Tdp2Q9JJX7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tdp2Q9JJX7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tdp2Q9JJX7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms