Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rcl1Q9JJT0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.63■□□□□ 0.41
Rcl1Q9JJT0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rcl1Q9JJT0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rcl1Q9JJT0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rcl1Q9JJT0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.61■□□□□ 0.41
Rcl1Q9JJT0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rcl1Q9JJT0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rcl1Q9JJT0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rcl1Q9JJT0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rcl1Q9JJT0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rcl1Q9JJT0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rcl1Q9JJT0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rcl1Q9JJT0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rcl1Q9JJT0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rcl1Q9JJT0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Iqck-206ENSMUST00000208658 2891 ntBASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rcl1Q9JJT0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rcl1Q9JJT0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rcl1Q9JJT0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Gm10420-201ENSMUST00000121713 882 ntBASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rcl1Q9JJT0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rcl1Q9JJT0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms