Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Herpud2Q9JJC9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Herpud2Q9JJC9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Herpud2Q9JJC9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Herpud2Q9JJC9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Herpud2Q9JJC9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herpud2Q9JJC9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herpud2Q9JJC9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Herpud2Q9JJC9 Gm9870-201ENSMUST00000063874 645 ntBASIC21.08■□□□□ 0.97
Herpud2Q9JJC9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Herpud2Q9JJC9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Herpud2Q9JJC9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herpud2Q9JJC9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herpud2Q9JJC9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Herpud2Q9JJC9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herpud2Q9JJC9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Herpud2Q9JJC9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Herpud2Q9JJC9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Herpud2Q9JJC9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Herpud2Q9JJC9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Herpud2Q9JJC9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Gm45417-201ENSMUST00000209533 758 ntBASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Herpud2Q9JJC9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Herpud2Q9JJC9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Herpud2Q9JJC9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21■□□□□ 0.95
Herpud2Q9JJC9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Herpud2Q9JJC9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herpud2Q9JJC9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.99■□□□□ 0.95
Herpud2Q9JJC9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herpud2Q9JJC9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Herpud2Q9JJC9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Herpud2Q9JJC9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms