Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4bQ9ES00 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4bQ9ES00 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4bQ9ES00 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4bQ9ES00 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4bQ9ES00 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ube4bQ9ES00 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ube4bQ9ES00 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ube4bQ9ES00 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4bQ9ES00 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ube4bQ9ES00 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ube4bQ9ES00 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ube4bQ9ES00 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4bQ9ES00 Gm7432-201ENSMUST00000210343 879 ntBASIC20■□□□□ 0.79
Ube4bQ9ES00 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4bQ9ES00 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.98■□□□□ 0.79
Ube4bQ9ES00 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4bQ9ES00 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4bQ9ES00 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.96■□□□□ 0.79
Ube4bQ9ES00 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4bQ9ES00 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4bQ9ES00 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4bQ9ES00 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms