Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lime1Q9EQR5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lime1Q9EQR5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lime1Q9EQR5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lime1Q9EQR5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lime1Q9EQR5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lime1Q9EQR5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lime1Q9EQR5 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lime1Q9EQR5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lime1Q9EQR5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lime1Q9EQR5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lime1Q9EQR5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lime1Q9EQR5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lime1Q9EQR5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lime1Q9EQR5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lime1Q9EQR5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.28■□□□□ 0.52
Lime1Q9EQR5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms