Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.7■□□□□ 0.58
Ap3s1Q9DCR2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ap3s1Q9DCR2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ap3s1Q9DCR2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ap3s1Q9DCR2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ap3s1Q9DCR2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ap3s1Q9DCR2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ap3s1Q9DCR2 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.67■□□□□ 0.58
Ap3s1Q9DCR2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ap3s1Q9DCR2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ap3s1Q9DCR2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ap3s1Q9DCR2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ap3s1Q9DCR2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.64■□□□□ 0.57
Ap3s1Q9DCR2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ap3s1Q9DCR2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ap3s1Q9DCR2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ap3s1Q9DCR2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ap3s1Q9DCR2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ap3s1Q9DCR2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Gm9812-201ENSMUST00000061934 968 ntBASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap3s1Q9DCR2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap3s1Q9DCR2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ap3s1Q9DCR2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms