Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4aQ9D3I8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4aQ9D3I8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4aQ9D3I8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4aQ9D3I8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4aQ9D3I8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4aQ9D3I8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4aQ9D3I8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rhox4aQ9D3I8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rhox4aQ9D3I8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rhox4aQ9D3I8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Rhox4aQ9D3I8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rhox4aQ9D3I8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4aQ9D3I8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4aQ9D3I8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Gm8503-201ENSMUST00000118131 455 ntBASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Gm9812-201ENSMUST00000061934 968 ntBASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4aQ9D3I8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4aQ9D3I8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rhox4aQ9D3I8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Gm22567-201ENSMUST00000175542 342 ntBASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Mir3960-201ENSMUST00000198213 73 ntBASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.21■□□□□ 0.35
Rhox4aQ9D3I8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rhox4aQ9D3I8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rhox4aQ9D3I8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms