Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
5530400C23RikQ9D3I0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
5530400C23RikQ9D3I0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
5530400C23RikQ9D3I0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
5530400C23RikQ9D3I0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
5530400C23RikQ9D3I0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
5530400C23RikQ9D3I0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
5530400C23RikQ9D3I0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.64■□□□□ 0.89
5530400C23RikQ9D3I0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.63■□□□□ 0.89
5530400C23RikQ9D3I0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
5530400C23RikQ9D3I0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
5530400C23RikQ9D3I0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
5530400C23RikQ9D3I0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
5530400C23RikQ9D3I0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
5530400C23RikQ9D3I0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
5530400C23RikQ9D3I0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
5530400C23RikQ9D3I0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
5530400C23RikQ9D3I0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.58■□□□□ 0.89
5530400C23RikQ9D3I0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
5530400C23RikQ9D3I0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
5530400C23RikQ9D3I0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5530400C23RikQ9D3I0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5530400C23RikQ9D3I0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
5530400C23RikQ9D3I0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
5530400C23RikQ9D3I0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms