Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim42Q9D2H5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim42Q9D2H5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim42Q9D2H5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim42Q9D2H5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.87■□□□□ 0.93
Trim42Q9D2H5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim42Q9D2H5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim42Q9D2H5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim42Q9D2H5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Gm8503-201ENSMUST00000118131 455 ntBASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim42Q9D2H5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim42Q9D2H5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim42Q9D2H5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim42Q9D2H5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trim42Q9D2H5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim42Q9D2H5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim42Q9D2H5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim42Q9D2H5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim42Q9D2H5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim42Q9D2H5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim42Q9D2H5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim42Q9D2H5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trim42Q9D2H5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim42Q9D2H5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim42Q9D2H5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim42Q9D2H5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Trim42Q9D2H5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim42Q9D2H5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim42Q9D2H5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim42Q9D2H5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim42Q9D2H5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim42Q9D2H5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim42Q9D2H5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.77■□□□□ 0.91
Trim42Q9D2H5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim42Q9D2H5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim42Q9D2H5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms