Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.33■□□□□ 0.68
Trim13Q9CYB0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim13Q9CYB0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim13Q9CYB0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim13Q9CYB0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim13Q9CYB0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim13Q9CYB0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Gm44428-201ENSMUST00000204474 874 ntBASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim13Q9CYB0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim13Q9CYB0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trim13Q9CYB0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim13Q9CYB0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim13Q9CYB0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim13Q9CYB0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim13Q9CYB0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.27■□□□□ 0.68
Trim13Q9CYB0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim13Q9CYB0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim13Q9CYB0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim13Q9CYB0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim13Q9CYB0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim13Q9CYB0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim13Q9CYB0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim13Q9CYB0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim13Q9CYB0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim13Q9CYB0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim13Q9CYB0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.24■□□□□ 0.67
Trim13Q9CYB0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Trim13Q9CYB0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim13Q9CYB0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim13Q9CYB0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim13Q9CYB0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim13Q9CYB0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim13Q9CYB0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim13Q9CYB0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trim13Q9CYB0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim13Q9CYB0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms