Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Gm6821-201ENSMUST00000107540 542 ntBASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx47Q9CWX9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx47Q9CWX9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Ddx47Q9CWX9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Ddx47Q9CWX9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx47Q9CWX9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx47Q9CWX9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx47Q9CWX9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx47Q9CWX9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx47Q9CWX9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx47Q9CWX9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx47Q9CWX9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx47Q9CWX9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx47Q9CWX9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx47Q9CWX9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx47Q9CWX9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx47Q9CWX9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx47Q9CWX9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Gm8503-201ENSMUST00000118131 455 ntBASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ddx47Q9CWX9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx47Q9CWX9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx47Q9CWX9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx47Q9CWX9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx47Q9CWX9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx47Q9CWX9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx47Q9CWX9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx47Q9CWX9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx47Q9CWX9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx47Q9CWX9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx47Q9CWX9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ddx47Q9CWX9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ddx47Q9CWX9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx47Q9CWX9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx47Q9CWX9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx47Q9CWX9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms