Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fcf1Q9CTH6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fcf1Q9CTH6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fcf1Q9CTH6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fcf1Q9CTH6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fcf1Q9CTH6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fcf1Q9CTH6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fcf1Q9CTH6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fcf1Q9CTH6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Fcf1Q9CTH6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.15■□□□□ 0.98
Fcf1Q9CTH6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Fcf1Q9CTH6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Fcf1Q9CTH6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Fcf1Q9CTH6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Fcf1Q9CTH6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Fcf1Q9CTH6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fcf1Q9CTH6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fcf1Q9CTH6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fcf1Q9CTH6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms