Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rer1Q9CQU3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rer1Q9CQU3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Rer1Q9CQU3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.14■□□□□ 0.33
Rer1Q9CQU3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Gm12366-201ENSMUST00000121722 873 ntBASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Gm5786-201ENSMUST00000085368 882 ntBASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Rer1Q9CQU3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Mir6538-201ENSMUST00000183713 110 ntBASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rer1Q9CQU3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rer1Q9CQU3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rer1Q9CQU3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rer1Q9CQU3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rer1Q9CQU3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rer1Q9CQU3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rer1Q9CQU3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.08■□□□□ 0.33
Rer1Q9CQU3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rer1Q9CQU3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rer1Q9CQU3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms