Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.46■□□□□ 0.55
Chmp1aQ921W0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp1aQ921W0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chmp1aQ921W0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Gm7432-201ENSMUST00000210343 879 ntBASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chmp1aQ921W0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.43■□□□□ 0.54
Chmp1aQ921W0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Gm11599-201ENSMUST00000118720 878 ntBASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp1aQ921W0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp1aQ921W0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp1aQ921W0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp1aQ921W0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp1aQ921W0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp1aQ921W0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp1aQ921W0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp1aQ921W0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.39■□□□□ 0.53
Chmp1aQ921W0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp1aQ921W0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Gm44428-201ENSMUST00000204474 874 ntBASIC18.37■□□□□ 0.53
Chmp1aQ921W0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp1aQ921W0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp1aQ921W0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.36■□□□□ 0.53
Chmp1aQ921W0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Chmp1aQ921W0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp1aQ921W0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp1aQ921W0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms