Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb13Q91Y06 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Pcdhb13Q91Y06 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb13Q91Y06 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb13Q91Y06 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb13Q91Y06 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb13Q91Y06 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhb13Q91Y06 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb13Q91Y06 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb13Q91Y06 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb13Q91Y06 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb13Q91Y06 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.16■□□□□ 0.98
Pcdhb13Q91Y06 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb13Q91Y06 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb13Q91Y06 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb13Q91Y06 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb13Q91Y06 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb13Q91Y06 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb13Q91Y06 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Pcdhb13Q91Y06 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb13Q91Y06 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Gm45444-201ENSMUST00000211394 898 ntBASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb13Q91Y06 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb13Q91Y06 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb13Q91Y06 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.1■□□□□ 0.97
Pcdhb13Q91Y06 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb13Q91Y06 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb13Q91Y06 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb13Q91Y06 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb13Q91Y06 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb13Q91Y06 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb13Q91Y06 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb13Q91Y06 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms