Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.19■□□□□ 0.82
Pcdhb20Q91XZ9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb20Q91XZ9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb20Q91XZ9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb20Q91XZ9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb20Q91XZ9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb20Q91XZ9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb20Q91XZ9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb20Q91XZ9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb20Q91XZ9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb20Q91XZ9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb20Q91XZ9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb20Q91XZ9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb20Q91XZ9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb20Q91XZ9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb20Q91XZ9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb20Q91XZ9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb20Q91XZ9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb20Q91XZ9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.08■□□□□ 0.81
Pcdhb20Q91XZ9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb20Q91XZ9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhb20Q91XZ9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdhb20Q91XZ9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb20Q91XZ9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb20Q91XZ9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb20Q91XZ9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms