Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhga9Q91XX9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhga9Q91XX9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhga9Q91XX9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Pcdhga9Q91XX9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdhga9Q91XX9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhga9Q91XX9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhga9Q91XX9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhga9Q91XX9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhga9Q91XX9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhga9Q91XX9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhga9Q91XX9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhga9Q91XX9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhga9Q91XX9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhga9Q91XX9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhga9Q91XX9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga9Q91XX9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga9Q91XX9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga9Q91XX9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Etf1-202ENSMUST00000180351 108 ntBASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga9Q91XX9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga9Q91XX9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga9Q91XX9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhga9Q91XX9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhga9Q91XX9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga9Q91XX9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga9Q91XX9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga9Q91XX9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhga9Q91XX9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhga9Q91XX9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhga9Q91XX9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms