Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb5Q91XX5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhgb5Q91XX5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb5Q91XX5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb5Q91XX5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb5Q91XX5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb5Q91XX5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhgb5Q91XX5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb5Q91XX5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb5Q91XX5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Gm27454-201ENSMUST00000185090 204 ntBASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb5Q91XX5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhgb5Q91XX5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Pcdhgb5Q91XX5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgb5Q91XX5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhgb5Q91XX5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.84■□□□□ 0.93
Pcdhgb5Q91XX5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb5Q91XX5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb5Q91XX5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.83■□□□□ 0.93
Pcdhgb5Q91XX5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb5Q91XX5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhgb5Q91XX5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb5Q91XX5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb5Q91XX5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Gm45417-201ENSMUST00000209533 758 ntBASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Gm9870-201ENSMUST00000063874 645 ntBASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdhgb5Q91XX5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb5Q91XX5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Pcdhgb5Q91XX5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb5Q91XX5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb5Q91XX5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhgb5Q91XX5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb5Q91XX5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms