Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.87■□□□□ 0.93
Vsx1Q91V10 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vsx1Q91V10 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vsx1Q91V10 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vsx1Q91V10 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vsx1Q91V10 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Vsx1Q91V10 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.86■□□□□ 0.93
Vsx1Q91V10 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vsx1Q91V10 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.85■□□□□ 0.93
Vsx1Q91V10 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vsx1Q91V10 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.84■□□□□ 0.93
Vsx1Q91V10 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vsx1Q91V10 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vsx1Q91V10 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vsx1Q91V10 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Vsx1Q91V10 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vsx1Q91V10 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.83■□□□□ 0.93
Vsx1Q91V10 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vsx1Q91V10 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vsx1Q91V10 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.82■□□□□ 0.92
Vsx1Q91V10 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.82■□□□□ 0.92
Vsx1Q91V10 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.82■□□□□ 0.92
Vsx1Q91V10 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Vsx1Q91V10 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Vsx1Q91V10 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vsx1Q91V10 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Vsx1Q91V10 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.81■□□□□ 0.92
Vsx1Q91V10 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vsx1Q91V10 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vsx1Q91V10 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.8■□□□□ 0.92
Vsx1Q91V10 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx1Q91V10 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Vsx1Q91V10 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx1Q91V10 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Gm43017-201ENSMUST00000198296 752 ntBASIC20.78■□□□□ 0.92
Vsx1Q91V10 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx1Q91V10 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx1Q91V10 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx1Q91V10 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx1Q91V10 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx1Q91V10 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx1Q91V10 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Vsx1Q91V10 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.76■□□□□ 0.91
Vsx1Q91V10 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.76■□□□□ 0.91
Vsx1Q91V10 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms