Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Fam20bQ8VCS3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam20bQ8VCS3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Fam20bQ8VCS3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam20bQ8VCS3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.41■□□□□ 0.7
Fam20bQ8VCS3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam20bQ8VCS3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam20bQ8VCS3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fam20bQ8VCS3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fam20bQ8VCS3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Fam20bQ8VCS3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fam20bQ8VCS3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fam20bQ8VCS3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Fam20bQ8VCS3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fam20bQ8VCS3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Terc-201ENSMUST00000082862 423 ntBASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.37■□□□□ 0.69
Fam20bQ8VCS3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Mir3960-201ENSMUST00000198213 73 ntBASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Fam20bQ8VCS3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam20bQ8VCS3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Fam20bQ8VCS3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.34■□□□□ 0.69
Fam20bQ8VCS3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam20bQ8VCS3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam20bQ8VCS3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Fam20bQ8VCS3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.33■□□□□ 0.69
Fam20bQ8VCS3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam20bQ8VCS3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Fam20bQ8VCS3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Fam20bQ8VCS3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Fam20bQ8VCS3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Fam20bQ8VCS3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam20bQ8VCS3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam20bQ8VCS3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam20bQ8VCS3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.32■□□□□ 0.68
Fam20bQ8VCS3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms