Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndc1Q8VCB1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ndc1Q8VCB1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ndc1Q8VCB1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ndc1Q8VCB1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ndc1Q8VCB1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndc1Q8VCB1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Gm10399-202ENSMUST00000202768 748 ntBASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ndc1Q8VCB1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndc1Q8VCB1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ndc1Q8VCB1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ndc1Q8VCB1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ndc1Q8VCB1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ndc1Q8VCB1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndc1Q8VCB1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndc1Q8VCB1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.78■□□□□ 0.76
Ndc1Q8VCB1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndc1Q8VCB1 Gm15039-201ENSMUST00000118914 875 ntBASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndc1Q8VCB1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ndc1Q8VCB1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndc1Q8VCB1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndc1Q8VCB1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndc1Q8VCB1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ndc1Q8VCB1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.74■□□□□ 0.75
Ndc1Q8VCB1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndc1Q8VCB1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndc1Q8VCB1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms