Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clptm1Q8VBZ3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clptm1Q8VBZ3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clptm1Q8VBZ3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Clptm1Q8VBZ3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.33■■□□□ 1.01
Clptm1Q8VBZ3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clptm1Q8VBZ3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Clptm1Q8VBZ3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.33■■□□□ 1.01
Clptm1Q8VBZ3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Clptm1Q8VBZ3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.33■■□□□ 1
Clptm1Q8VBZ3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Clptm1Q8VBZ3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Clptm1Q8VBZ3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Clptm1Q8VBZ3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Clptm1Q8VBZ3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Clptm1Q8VBZ3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.3■■□□□ 1
Clptm1Q8VBZ3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clptm1Q8VBZ3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.3■■□□□ 1
Clptm1Q8VBZ3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Clptm1Q8VBZ3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Clptm1Q8VBZ3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clptm1Q8VBZ3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Clptm1Q8VBZ3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Clptm1Q8VBZ3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Clptm1Q8VBZ3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.28■■□□□ 1
Clptm1Q8VBZ3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clptm1Q8VBZ3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.27■■□□□ 1
Clptm1Q8VBZ3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clptm1Q8VBZ3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Clptm1Q8VBZ3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clptm1Q8VBZ3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clptm1Q8VBZ3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clptm1Q8VBZ3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clptm1Q8VBZ3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clptm1Q8VBZ3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clptm1Q8VBZ3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms