Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup35Q8R4R6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.15■□□□□ 0.34
Nup35Q8R4R6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup35Q8R4R6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup35Q8R4R6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup35Q8R4R6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup35Q8R4R6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.12■□□□□ 0.33
Nup35Q8R4R6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup35Q8R4R6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nup35Q8R4R6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup35Q8R4R6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup35Q8R4R6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup35Q8R4R6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nup35Q8R4R6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup35Q8R4R6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup35Q8R4R6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup35Q8R4R6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup35Q8R4R6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup35Q8R4R6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.08■□□□□ 0.32
Nup35Q8R4R6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.08■□□□□ 0.32
Nup35Q8R4R6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup35Q8R4R6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup35Q8R4R6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup35Q8R4R6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup35Q8R4R6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.06■□□□□ 0.32
Nup35Q8R4R6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup35Q8R4R6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup35Q8R4R6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms