Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Atp2a1Q8R429 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
Atp2a1Q8R429 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.55■■□□□ 1.36
Atp2a1Q8R429 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Atp2a1Q8R429 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atp2a1Q8R429 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp2a1Q8R429 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp2a1Q8R429 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp2a1Q8R429 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Atp2a1Q8R429 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atp2a1Q8R429 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Atp2a1Q8R429 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Atp2a1Q8R429 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.48■■□□□ 1.35
Atp2a1Q8R429 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atp2a1Q8R429 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Atp2a1Q8R429 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Atp2a1Q8R429 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.46■■□□□ 1.35
Atp2a1Q8R429 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Atp2a1Q8R429 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Atp2a1Q8R429 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Atp2a1Q8R429 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.43■■□□□ 1.34
Atp2a1Q8R429 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms