Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk3Q8K3G5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk3Q8K3G5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk3Q8K3G5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk3Q8K3G5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Cap2-205ENSMUST00000225824 1634 ntBASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk3Q8K3G5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.74■□□□□ 0.43
Vrk3Q8K3G5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk3Q8K3G5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk3Q8K3G5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk3Q8K3G5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.71■□□□□ 0.43
Vrk3Q8K3G5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk3Q8K3G5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk3Q8K3G5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk3Q8K3G5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vrk3Q8K3G5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vrk3Q8K3G5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk3Q8K3G5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk3Q8K3G5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vrk3Q8K3G5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk3Q8K3G5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk3Q8K3G5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vrk3Q8K3G5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vrk3Q8K3G5 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms