Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scara5Q8K299 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Scara5Q8K299 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.1■□□□□ 0.97
Scara5Q8K299 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Scara5Q8K299 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scara5Q8K299 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.09■□□□□ 0.97
Scara5Q8K299 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.09■□□□□ 0.97
Scara5Q8K299 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scara5Q8K299 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scara5Q8K299 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.08■□□□□ 0.97
Scara5Q8K299 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scara5Q8K299 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Scara5Q8K299 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
Scara5Q8K299 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scara5Q8K299 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scara5Q8K299 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scara5Q8K299 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.08■□□□□ 0.96
Scara5Q8K299 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Scara5Q8K299 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scara5Q8K299 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.07■□□□□ 0.96
Scara5Q8K299 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scara5Q8K299 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.07■□□□□ 0.96
Scara5Q8K299 Gm6139-201ENSMUST00000079261 882 ntBASIC21.07■□□□□ 0.96
Scara5Q8K299 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scara5Q8K299 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.07■□□□□ 0.96
Scara5Q8K299 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scara5Q8K299 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scara5Q8K299 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.06■□□□□ 0.96
Scara5Q8K299 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scara5Q8K299 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.06■□□□□ 0.96
Scara5Q8K299 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Scara5Q8K299 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.05■□□□□ 0.96
Scara5Q8K299 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scara5Q8K299 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scara5Q8K299 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Scara5Q8K299 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Scara5Q8K299 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scara5Q8K299 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Scara5Q8K299 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scara5Q8K299 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scara5Q8K299 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.03■□□□□ 0.96
Scara5Q8K299 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Scara5Q8K299 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scara5Q8K299 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scara5Q8K299 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scara5Q8K299 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scara5Q8K299 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scara5Q8K299 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.02■□□□□ 0.96
Scara5Q8K299 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scara5Q8K299 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scara5Q8K299 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Scara5Q8K299 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scara5Q8K299 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Scara5Q8K299 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scara5Q8K299 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scara5Q8K299 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scara5Q8K299 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scara5Q8K299 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21■□□□□ 0.95
Scara5Q8K299 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scara5Q8K299 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Scara5Q8K299 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Scara5Q8K299 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scara5Q8K299 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scara5Q8K299 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.99■□□□□ 0.95
Scara5Q8K299 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Scara5Q8K299 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scara5Q8K299 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.98■□□□□ 0.95
Scara5Q8K299 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Scara5Q8K299 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.98■□□□□ 0.95
Scara5Q8K299 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms