Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.33■■□□□ 1.01
Trpm6Q8CIR4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm6Q8CIR4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm6Q8CIR4 Serp2-204ENSMUST00000228055 705 ntBASIC21.33■■□□□ 1.01
Trpm6Q8CIR4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Trpm6Q8CIR4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.33■■□□□ 1
Trpm6Q8CIR4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trpm6Q8CIR4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.31■■□□□ 1
Trpm6Q8CIR4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm6Q8CIR4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm6Q8CIR4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpm6Q8CIR4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.31■■□□□ 1
Trpm6Q8CIR4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.3■■□□□ 1
Trpm6Q8CIR4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trpm6Q8CIR4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm6Q8CIR4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trpm6Q8CIR4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Trpm6Q8CIR4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm6Q8CIR4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.28■■□□□ 1
Trpm6Q8CIR4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.27■■□□□ 1
Trpm6Q8CIR4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm6Q8CIR4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm6Q8CIR4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm6Q8CIR4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm6Q8CIR4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Trpm6Q8CIR4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trpm6Q8CIR4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trpm6Q8CIR4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm6Q8CIR4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm6Q8CIR4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm6Q8CIR4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms