Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.05■□□□□ 0.96
Clip4Q8CI96 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clip4Q8CI96 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clip4Q8CI96 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Clip4Q8CI96 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Clip4Q8CI96 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clip4Q8CI96 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.04■□□□□ 0.96
Clip4Q8CI96 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clip4Q8CI96 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.04■□□□□ 0.96
Clip4Q8CI96 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Clip4Q8CI96 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clip4Q8CI96 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clip4Q8CI96 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.02■□□□□ 0.95
Clip4Q8CI96 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clip4Q8CI96 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clip4Q8CI96 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Clip4Q8CI96 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clip4Q8CI96 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clip4Q8CI96 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Clip4Q8CI96 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21■□□□□ 0.95
Clip4Q8CI96 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clip4Q8CI96 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Clip4Q8CI96 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clip4Q8CI96 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip4Q8CI96 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Clip4Q8CI96 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip4Q8CI96 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clip4Q8CI96 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip4Q8CI96 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.97■□□□□ 0.95
Clip4Q8CI96 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clip4Q8CI96 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Notumos-201ENSMUST00000151998 2659 ntBASIC20.96■□□□□ 0.95
Clip4Q8CI96 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Gm15546-201ENSMUST00000122095 826 ntBASIC20.96■□□□□ 0.95
Clip4Q8CI96 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip4Q8CI96 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.95■□□□□ 0.94
Clip4Q8CI96 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip4Q8CI96 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.94■□□□□ 0.94
Clip4Q8CI96 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.94■□□□□ 0.94
Clip4Q8CI96 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Clip4Q8CI96 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clip4Q8CI96 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms