Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rdh1Q8CGV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh1Q8CGV4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh1Q8CGV4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh1Q8CGV4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rdh1Q8CGV4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rdh1Q8CGV4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh1Q8CGV4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.51■□□□□ 0.87
Rdh1Q8CGV4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh1Q8CGV4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rdh1Q8CGV4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh1Q8CGV4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh1Q8CGV4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh1Q8CGV4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rdh1Q8CGV4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rdh1Q8CGV4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.47■□□□□ 0.87
Rdh1Q8CGV4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Rdh1Q8CGV4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rdh1Q8CGV4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh1Q8CGV4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh1Q8CGV4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh1Q8CGV4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Gm12922-201ENSMUST00000120626 809 ntBASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh1Q8CGV4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh1Q8CGV4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms