Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Snhg20-203ENSMUST00000182811 2153 ntBASIC26.15■■□□□ 1.78
Smc5Q8CG46 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc5Q8CG46 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC26.14■■□□□ 1.78
Smc5Q8CG46 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smc5Q8CG46 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Smc5Q8CG46 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc5Q8CG46 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc5Q8CG46 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Smc5Q8CG46 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc5Q8CG46 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Gm27502-201ENSMUST00000183495 199 ntBASIC26.13■■□□□ 1.77
Smc5Q8CG46 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smc5Q8CG46 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smc5Q8CG46 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Smc5Q8CG46 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smc5Q8CG46 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.1■■□□□ 1.77
Smc5Q8CG46 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smc5Q8CG46 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Smc5Q8CG46 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc5Q8CG46 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc5Q8CG46 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.09■■□□□ 1.77
Smc5Q8CG46 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc5Q8CG46 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc5Q8CG46 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Smc5Q8CG46 Gm14523-201ENSMUST00000117260 558 ntBASIC26.08■■□□□ 1.77
Smc5Q8CG46 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Smc5Q8CG46 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Smc5Q8CG46 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc5Q8CG46 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc5Q8CG46 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
Smc5Q8CG46 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc5Q8CG46 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Smc5Q8CG46 Gm11175-201ENSMUST00000116172 543 ntBASIC26.03■■□□□ 1.76
Smc5Q8CG46 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.03■■□□□ 1.76
Smc5Q8CG46 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.03■■□□□ 1.76
Smc5Q8CG46 Gm5913-201ENSMUST00000119397 1399 ntBASIC26.03■■□□□ 1.76
Smc5Q8CG46 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smc5Q8CG46 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smc5Q8CG46 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms