Protein–RNA interactions for Protein: Q8CEE7

Rdh13, Retinol dehydrogenase 13, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh13Q8CEE7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh13Q8CEE7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh13Q8CEE7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh13Q8CEE7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh13Q8CEE7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh13Q8CEE7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh13Q8CEE7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Rdh13Q8CEE7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.39■□□□□ 0.85
Rdh13Q8CEE7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh13Q8CEE7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh13Q8CEE7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh13Q8CEE7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh13Q8CEE7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh13Q8CEE7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh13Q8CEE7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh13Q8CEE7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh13Q8CEE7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh13Q8CEE7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh13Q8CEE7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Rdh13Q8CEE7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh13Q8CEE7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh13Q8CEE7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rdh13Q8CEE7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rdh13Q8CEE7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh13Q8CEE7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh13Q8CEE7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh13Q8CEE7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh13Q8CEE7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms