Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx6Q8C7R7 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.33■■□□□ 1.01
Rfx6Q8C7R7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rfx6Q8C7R7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx6Q8C7R7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx6Q8C7R7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfx6Q8C7R7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfx6Q8C7R7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx6Q8C7R7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx6Q8C7R7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
Rfx6Q8C7R7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfx6Q8C7R7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx6Q8C7R7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx6Q8C7R7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx6Q8C7R7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx6Q8C7R7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx6Q8C7R7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx6Q8C7R7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx6Q8C7R7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfx6Q8C7R7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx6Q8C7R7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.27■■□□□ 1
Rfx6Q8C7R7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx6Q8C7R7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfx6Q8C7R7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Rfx6Q8C7R7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx6Q8C7R7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Rfx6Q8C7R7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx6Q8C7R7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rfx6Q8C7R7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.23■□□□□ 0.99
Rfx6Q8C7R7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfx6Q8C7R7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx6Q8C7R7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx6Q8C7R7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.21■□□□□ 0.99
Rfx6Q8C7R7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx6Q8C7R7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx6Q8C7R7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx6Q8C7R7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.2■□□□□ 0.98
Rfx6Q8C7R7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms