Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.15■□□□□ 0.66
Col6a6Q8C6K9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a6Q8C6K9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a6Q8C6K9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a6Q8C6K9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.14■□□□□ 0.65
Col6a6Q8C6K9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col6a6Q8C6K9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Col6a6Q8C6K9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a6Q8C6K9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a6Q8C6K9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a6Q8C6K9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.1■□□□□ 0.65
Col6a6Q8C6K9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
Col6a6Q8C6K9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a6Q8C6K9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a6Q8C6K9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.09■□□□□ 0.65
Col6a6Q8C6K9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.09■□□□□ 0.65
Col6a6Q8C6K9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a6Q8C6K9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a6Q8C6K9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a6Q8C6K9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Col6a6Q8C6K9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a6Q8C6K9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a6Q8C6K9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.07■□□□□ 0.64
Col6a6Q8C6K9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a6Q8C6K9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a6Q8C6K9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a6Q8C6K9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a6Q8C6K9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms